Skip to main content

Table 1 Accepted biomarkers for glycolysis, β-oxidation, TCA cycle function, oxidative phosphorylation and mitochondrial density

From: Skeletal muscle energy metabolism in environmental hypoxia: climbing towards consensus

Aspect of metabolism

Biomarkers

 

Expression, levels or activity of enzymes/transporters

Expression, levels or activity of regulators

Rate measurements

Other validated markers [ [13]]

Glycolysis

    
 

Monocarboxylate transporters (MCT)

   

Hexokinase (HK)

   

Phosphoglucose isomerase (PGI)

   

Phosphofructokinase (PFK)

   

Aldolase (ALD)

   

Triose phosphate isomerase (TPI)

   

Glyceraldehyde 3-phosphate dehydrogenase (G3PDH)

   

Phosphoglycerate kinase (PGK)

   

Phosphoglycerate mutase (PGM)

   

Enolase (ENO)

   

Pyruvate kinase (PyK)

   

Lactate dehydrogenase (LDH)

   
   

Glucose oxidation

 

β-oxidation

    
 

Carnitine acylcarnitine translocase (CACT)

   

Carnitine palmitoyl transferases (CPT)

   

Acyl CoA dehydrogenases

   

Enoyl CoA hydratase (ECAH)

   

Enoyl CoA isomerase (ECAI)

   

L-3-hydroxyacyl CoA dehydrogenase (HOAD)

   

Thiolase (THI)

   
 

PPARα

  
  

Uptake/utilisation of fatty acids

 
   

Oxidative phosphorylation with fatty acid substrates

 

TCA cycle

    
 

Pyruvate dehydrogenase

   

Citrate synthase

   

Aconitase

   

Isocitrate dehydrogenase

   

α-ketoglutarate dehydrogenase

   

Succinyl CoA synthetase

   

Succinate dehydrogenase

   

Fumarase

   
 

Malate dehydrogenase

   

Oxidative phosphorylation

    
 

Complex I

   

Complex II

   

Complex III

   

Complex IV

   

Complex V

   

Electron transferring flavoprotein (ETF)

   
   

Oxidative phosphorylation

 

Mitochondrial density (mitochondrial density measurements by electron microscopy)

    
 

Bax

   

Bcl-2*

   

BNIP3*

   

PGC-1α

   
   

Citrate synthase activity

    

Complex IV activity

  1. *biomarkers used as negative indicators of the process.